Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EXZ48_18945 | Not Available | Positive | 4021480 - 4022169 | 25150.6 |
| hamp domain-containing histidine kinase | EXZ48_18950 | Not Available | Positive | 4022166 - 4023227 | 38298.7 |
| n-acetyltransferase | EXZ48_18955 | Not Available | Positive | 4023445 - 4023966 | 19261.7 |
| hypothetical protein | EXZ48_18960 | Not Available | Positive | 4024289 - 4024960 | 23887.7 |
| hypothetical protein | EXZ48_18965 | Not Available | Positive | 4024998 - 4025378 | 14000.3 |
| fatty acid desaturase | EXZ48_18970 | Not Available | Positive | 4025486 - 4026514 | 38816.4 |
| transporter substrate-binding domain-containing protein | EXZ48_18975 | Not Available | Positive | 4026968 - 4028011 | 36746.6 |
| hypothetical protein | EXZ48_18980 | Not Available | Positive | 4028041 - 4028622 | 20602.8 |
| gntr family transcriptional regulator | EXZ48_18985 | Not Available | Positive | 4028667 - 4029239 | 20949.4 |
| phosphatase | EXZ48_18990 | Not Available | Positive | 4029236 - 4029763 | 18545.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
