Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EXZ48_18895 | Not Available | Positive | 4009640 - 4010626 | 35219.9 |
| d-threitol dehydrogenase | EXZ48_18900 | Not Available | Positive | 4010687 - 4011460 | 26238.5 |
| dihydroxyacetone kinase subunit dhak | EXZ48_18905 | Not Available | Positive | 4011472 - 4012464 | 35141.4 |
| dihydroxyacetone kinase subunit l | EXZ48_18910 | Not Available | Positive | 4012478 - 4013119 | 21906.2 |
| dihydroxyacetone kinase subunit dhak | EXZ48_18915 | Not Available | Positive | 4013256 - 4015373 | 74844.9 |
| dihydroxyacetone kinase subunit l | EXZ48_18920 | Not Available | Positive | 4015403 - 4016038 | 21869.9 |
| duf2191 domain-containing protein | EXZ48_18925 | Not Available | Positive | 4016219 - 4016419 | 7255.81 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_18930 | Not Available | Positive | 4016416 - 4016799 | 14016.0 |
| multidrug efflux rnd transporter permease subunit | EXZ48_18935 | Not Available | Negative | 4017031 - 4020144 | 109985.0 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_18940 | Not Available | Negative | 4020155 - 4021318 | 41427.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
