Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional enoyl-coa hydratase/phosphate acetyltransferase | EXZ48_18790 | Not Available | Negative | 3987198 - 3988127 | 32294.4 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_18795 | Not Available | Negative | 3988167 - 3989264 | 40026.4 |
| nad(p)-dependent alcohol dehydrogenase | EXZ48_18800 | Not Available | Negative | 3989267 - 3990310 | 35989.4 |
| carbohydrate abc transporter permease | EXZ48_18805 | Not Available | Negative | 3990328 - 3991140 | 29188.4 |
| sugar abc transporter permease | EXZ48_18810 | Not Available | Negative | 3991137 - 3992000 | 32096.4 |
| sugar abc transporter substrate-binding protein | EXZ48_18815 | Not Available | Negative | 3992067 - 3993344 | 45741.8 |
| arac family transcriptional regulator | EXZ48_18820 | Not Available | Negative | 3993546 - 3994490 | 35719.4 |
| gntr family transcriptional regulator | EXZ48_18825 | Not Available | Positive | 3994930 - 3995637 | 26569.2 |
| abc transporter permease | EXZ48_18830 | Not Available | Positive | 3995634 - 3996494 | 30803.2 |
| abc transporter permease | EXZ48_18835 | Not Available | Positive | 3996491 - 3997279 | 27254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
