Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-siderophore abc transporter substrate-binding protein | EXZ48_18690 | Not Available | Positive | 3967415 - 3968407 | 35085.0 |
| iron abc transporter permease | EXZ48_18695 | Not Available | Positive | 3968404 - 3969444 | 34858.7 |
| iron abc transporter permease | EXZ48_18700 | Not Available | Positive | 3969441 - 3970481 | 35604.8 |
| abc transporter atp-binding protein | EXZ48_18705 | Not Available | Positive | 3970478 - 3971299 | 29614.0 |
| siderophore-interacting protein | EXZ48_18710 | Not Available | Positive | 3971296 - 3972360 | 38928.4 |
| duf4130 domain-containing protein | EXZ48_18715 | Not Available | Negative | 3972523 - 3973980 | 54515.6 |
| putative dna modification/repair radical sam protein | EXZ48_18720 | Not Available | Negative | 3973980 - 3975209 | 45698.2 |
| pyridine nucleotide-disulfide oxidoreductase | EXZ48_18725 | Not Available | Negative | 3975345 - 3976547 | 43021.7 |
| d-glycerate dehydrogenase | EXZ48_18730 | Not Available | Negative | 3976570 - 3977532 | 33862.0 |
| creatininase family protein | EXZ48_18735 | Not Available | Positive | 3977750 - 3978550 | 28962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
