Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_18640 | Not Available | Positive | 3955178 - 3956107 | 31220.5 |
| hypothetical protein | EXZ48_18645 | Not Available | Positive | 3956097 - 3957572 | 51348.8 |
| carbohydrate kinase | EXZ48_18650 | Not Available | Positive | 3957569 - 3959080 | 53163.7 |
| voc family protein | EXZ48_18655 | Not Available | Negative | 3959099 - 3959503 | 15236.0 |
| efflux rnd transporter periplasmic adaptor subunit | EXZ48_18660 | Not Available | Positive | 3959720 - 3960823 | 38896.8 |
| abc transporter atp-binding protein | EXZ48_18665 | Not Available | Positive | 3960820 - 3961521 | 25614.3 |
| abc transporter permease | EXZ48_18670 | Not Available | Positive | 3961521 - 3962663 | 40319.7 |
| abc transporter permease | EXZ48_18675 | Not Available | Positive | 3962669 - 3963880 | 42134.1 |
| arac family transcriptional regulator | EXZ48_18680 | Not Available | Positive | 3964123 - 3964998 | 32034.6 |
| tonb-dependent siderophore receptor | EXZ48_18685 | Not Available | Negative | 3965005 - 3967137 | 77739.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
