Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | EXZ48_18590 | Not Available | Positive | 3944456 - 3944755 | 10961.1 |
| aldehyde dehydrogenase family protein | EXZ48_18595 | Not Available | Positive | 3944781 - 3946280 | 52948.4 |
| zn-dependent hydrolase | EXZ48_18600 | Not Available | Positive | 3946351 - 3947601 | 44282.7 |
| phosphotriesterase | EXZ48_18605 | Not Available | Negative | 3947663 - 3948637 | 35526.5 |
| phosphotriesterase-related protein | EXZ48_18610 | Not Available | Positive | 3948797 - 3949711 | 33220.8 |
| creatininase family protein | EXZ48_18615 | Not Available | Positive | 3949736 - 3950464 | 26621.9 |
| murr/rpir family transcriptional regulator | EXZ48_18620 | Not Available | Positive | 3950509 - 3951375 | 31488.9 |
| hypothetical protein | EXZ48_18625 | Not Available | Positive | 3951553 - 3952629 | 38229.4 |
| sugar abc transporter atp-binding protein | EXZ48_18630 | Not Available | Positive | 3952777 - 3954204 | 51250.3 |
| abc transporter permease | EXZ48_18635 | Not Available | Positive | 3954201 - 3955181 | 33259.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
