Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-chlorohydroxyquinol-1,2-dioxygenase | EXZ48_18540 | Not Available | Positive | 3934899 - 3935798 | 33952.3 |
| lysr family transcriptional regulator | EXZ48_18545 | Not Available | Negative | 3935911 - 3936810 | 33171.0 |
| hydrolase | EXZ48_18550 | Not Available | Positive | 3936967 - 3937656 | 25457.2 |
| marr family transcriptional regulator | EXZ48_18555 | Not Available | Negative | 3937747 - 3938163 | 15638.0 |
| abc transporter substrate-binding protein | EXZ48_18560 | Not Available | Positive | 3938317 - 3939513 | 43190.3 |
| urea abc transporter | EXZ48_18565 | Not Available | Positive | 3939820 - 3941037 | 43851.8 |
| branched-chain amino acid abc transporter permease | EXZ48_18570 | Not Available | Positive | 3941103 - 3941969 | 29861.8 |
| branched-chain amino acid abc transporter permease | EXZ48_18575 | Not Available | Positive | 3941966 - 3943003 | 36239.5 |
| abc transporter atp-binding protein | EXZ48_18580 | Not Available | Positive | 3943000 - 3943722 | 26480.1 |
| abc transporter atp-binding protein | EXZ48_18585 | Not Available | Positive | 3943712 - 3944425 | 25233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
