Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | EXZ48_18340 | Not Available | Negative | 3894112 - 3894915 | 27948.5 |
| sugar phosphate isomerase/epimerase | EXZ48_18345 | Not Available | Negative | 3894912 - 3895745 | 29431.0 |
| gfo/idh/moca family oxidoreductase | EXZ48_18350 | Not Available | Negative | 3895745 - 3896821 | 39327.8 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_18355 | Not Available | Negative | 3896908 - 3898053 | 41184.9 |
| hypothetical protein | EXZ48_18360 | Not Available | Negative | 3898147 - 3898437 | 10852.8 |
| permease | EXZ48_18365 | Not Available | Negative | 3898380 - 3899309 | 32266.4 |
| aldolase | EXZ48_18370 | Not Available | Negative | 3899313 - 3900113 | 27920.2 |
| deor/glpr transcriptional regulator | EXZ48_18375 | Not Available | Positive | 3900317 - 3901078 | 27928.0 |
| sugar phosphate isomerase/epimerase | EXZ48_18380 | Not Available | Negative | 3901138 - 3901956 | 28815.1 |
| gfo/idh/moca family oxidoreductase | EXZ48_18385 | Not Available | Positive | 3902218 - 3903366 | 41153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
