Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_18245 | Not Available | Negative | 3871053 - 3872009 | 32900.2 |
| abc transporter permease | EXZ48_18250 | Not Available | Negative | 3872006 - 3872983 | 33274.2 |
| autoinducer 2 abc transporter substrate-binding protein | EXZ48_18255 | Not Available | Negative | 3873002 - 3873988 | 34027.5 |
| sugar abc transporter atp-binding protein | EXZ48_18260 | Not Available | Negative | 3874020 - 3874793 | 27726.5 |
| cytoplasmic protein | EXZ48_18265 | Not Available | Negative | 3874815 - 3875588 | 28022.5 |
| laci family dna-binding transcriptional regulator | EXZ48_18270 | Not Available | Negative | 3875629 - 3876807 | 41418.9 |
| globin-coupled sensor protein | EXZ48_18275 | Not Available | Positive | 3877174 - 3878721 | 54735.1 |
| crp/fnr family transcriptional regulator | EXZ48_18280 | Not Available | Negative | 3878775 - 3879455 | 24945.1 |
| eal domain-containing protein | EXZ48_18285 | Not Available | Positive | 3879599 - 3881887 | 84155.9 |
| selenide, water dikinase seld | EXZ48_18290 | Not Available | Negative | 3882040 - 3883149 | 37480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
