Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation inhibitor maf | EXZ48_18145 | Not Available | Negative | 3850273 - 3850872 | 21336.9 |
| bacteriocin | EXZ48_18150 | Not Available | Negative | 3850932 - 3851732 | 28310.5 |
| dyp-type peroxidase | EXZ48_18155 | Not Available | Negative | 3851725 - 3852777 | 38111.3 |
| duf2171 domain-containing protein | EXZ48_18160 | Not Available | Negative | 3852843 - 3853097 | 9168.85 |
| hypothetical protein | EXZ48_18165 | Not Available | Negative | 3853466 - 3853741 | 10327.6 |
| j domain-containing protein | EXZ48_18170 | Not Available | Negative | 3853750 - 3854652 | 32154.8 |
| sdr family nad(p)-dependent oxidoreductase | EXZ48_18175 | Not Available | Negative | 3855140 - 3855838 | 24211.3 |
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_18180 | Not Available | Negative | 3855843 - 3857297 | 52112.8 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EXZ48_18185 | Not Available | Negative | 3857294 - 3858598 | 46877.5 |
| hypothetical protein | EXZ48_18190 | Not Available | Negative | 3858695 - 3858886 | 7036.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
