Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | EXZ48_18095 | Not Available | Negative | 3840507 - 3841202 | 24199.0 |
| lysr family transcriptional regulator | EXZ48_18100 | Not Available | Positive | 3841356 - 3842261 | 32998.2 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | EXZ48_18105 | Not Available | Negative | 3842325 - 3843314 | 37658.5 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | EXZ48_18110 | Not Available | Negative | 3843329 - 3845485 | 81606.9 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | EXZ48_18115 | Not Available | Negative | 3845473 - 3845868 | 14440.3 |
| glutaredoxin-like protein nrdh | EXZ48_18120 | Not Available | Negative | 3845879 - 3846100 | 7934.51 |
| cold-shock protein | EXZ48_18125 | Not Available | Positive | 3846786 - 3846989 | 7076.28 |
| mfs transporter | EXZ48_18130 | Not Available | Positive | 3847086 - 3848297 | 42684.9 |
| cardiolipin synthase | EXZ48_18135 | Not Available | Negative | 3848386 - 3849807 | 52091.4 |
| hypothetical protein | EXZ48_18140 | Not Available | Negative | 3849804 - 3850226 | 15825.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
