Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | EXZ48_17995 | Not Available | Positive | 3821054 - 3823021 | 72483.4 |
| voc family protein | EXZ48_18000 | Not Available | Negative | 3823036 - 3823419 | 13232.3 |
| dna helicase recq | EXZ48_18005 | Not Available | Positive | 3823562 - 3825430 | 68060.5 |
| voc family protein | EXZ48_18010 | Not Available | Positive | 3825506 - 3825976 | 17050.3 |
| sdr family oxidoreductase | EXZ48_18015 | Not Available | Negative | 3826001 - 3826771 | 26531.8 |
| class i sam-dependent methyltransferase | EXZ48_18020 | Not Available | Positive | 3826909 - 3827637 | 26901.0 |
| gfa family protein | EXZ48_18025 | Not Available | Positive | 3827767 - 3828222 | 16394.7 |
| glycine c-acetyltransferase | EXZ48_18030 | Not Available | Positive | 3828269 - 3828387 | 4191.07 |
| atp-binding protein | EXZ48_18035 | Not Available | Negative | 3828388 - 3828896 | 19238.8 |
| is21 family transposase | EXZ48_18040 | Not Available | Negative | 3828893 - 3830389 | 56792.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
