Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | EXZ48_17895 | Not Available | Negative | 3799841 - 3800317 | 17478.6 |
| carbamoyl-phosphate synthase large subunit | EXZ48_17900 | Not Available | Negative | 3800631 - 3804113 | 125739.0 |
| tetr/acrr family transcriptional regulator | EXZ48_17905 | Not Available | Negative | 3804302 - 3804877 | 20208.6 |
| pentachlorophenol monooxygenase | EXZ48_17910 | Not Available | Positive | 3804962 - 3806143 | 42094.3 |
| class d beta-lactamase | EXZ48_17915 | Not Available | Negative | 3806170 - 3806976 | 30108.8 |
| lysr family transcriptional regulator | EXZ48_17920 | Not Available | Positive | 3807087 - 3807974 | 32246.1 |
| iditol 2-dehydrogenase | EXZ48_17925 | Not Available | Negative | 3807971 - 3809002 | 36133.2 |
| dihydrofolate reductase | EXZ48_17930 | Not Available | Negative | 3809071 - 3809730 | 23841.2 |
| lyttr family transcriptional regulator | EXZ48_17935 | Not Available | Negative | 3809809 - 3810606 | 28878.5 |
| duf2306 domain-containing protein | EXZ48_17940 | Not Available | Positive | 3810697 - 3811218 | 18436.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
