Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs1 family nucleobase:cation symporter-1 | EXZ48_17845 | Not Available | Negative | 3787721 - 3789199 | 53263.0 |
| lysr family transcriptional regulator | EXZ48_17850 | Not Available | Negative | 3789875 - 3790771 | 33839.7 |
| thioredoxin-disulfide reductase | EXZ48_17855 | Not Available | Negative | 3790884 - 3791858 | 34972.0 |
| lrp/asnc family transcriptional regulator | EXZ48_17860 | Not Available | Positive | 3792112 - 3792579 | 17182.0 |
| nucleoside-diphosphate sugar epimerase | EXZ48_17865 | Not Available | Negative | 3792551 - 3793534 | 35119.7 |
| glycosyltransferase | EXZ48_17870 | Not Available | Negative | 3793536 - 3795770 | 78895.3 |
| hypothetical protein | EXZ48_17875 | Not Available | Positive | 3795885 - 3796616 | 28177.6 |
| gdp-l-fucose synthase | EXZ48_17880 | Not Available | Negative | 3796654 - 3797589 | 34301.4 |
| gdp-mannose 4,6-dehydratase | EXZ48_17885 | Not Available | Negative | 3797590 - 3798660 | 40279.7 |
| glycosyltransferase | EXZ48_17890 | Not Available | Negative | 3798748 - 3799728 | 36899.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
