Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | EXZ48_17795 | Not Available | Negative | 3779914 - 3780129 | 7523.89 |
| pqq-dependent sugar dehydrogenase | EXZ48_17800 | Not Available | Negative | 3780582 - 3781751 | 41343.1 |
| hypothetical protein | EXZ48_17805 | Not Available | Negative | 3781826 - 3782026 | 7152.93 |
| eal domain-containing protein | EXZ48_17810 | Not Available | Negative | 3782199 - 3783119 | 33473.1 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_17815 | Not Available | Positive | 3783432 - 3784634 | 43507.1 |
| hypothetical protein | EXZ48_17820 | Not Available | Positive | 3784753 - 3784998 | 9071.67 |
| alkene reductase | EXZ48_17825 | Not Available | Negative | 3785202 - 3786323 | 39874.8 |
| transcriptional regulator | EXZ48_17830 | Not Available | Negative | 3786361 - 3786666 | 11401.7 |
| hypothetical protein | EXZ48_17835 | Not Available | Negative | 3786893 - 3787168 | 9773.89 |
| nucleoside deaminase | EXZ48_17840 | Not Available | Negative | 3787263 - 3787724 | 16342.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
