Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_17595 | Not Available | Positive | 3741913 - 3743781 | 68657.7 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | EXZ48_17600 | Not Available | Positive | 3744045 - 3744623 | 20435.3 |
| cytochrome b | EXZ48_17605 | Not Available | Positive | 3744638 - 3745906 | 47755.1 |
| cytochrome c1 | EXZ48_17610 | Not Available | Positive | 3745934 - 3746821 | 32053.6 |
| adenine phosphoribosyltransferase | EXZ48_17615 | Not Available | Positive | 3746929 - 3747471 | 19396.9 |
| maoc family dehydratase | EXZ48_17620 | Not Available | Negative | 3747655 - 3748122 | 17102.5 |
| maoc family dehydratase | EXZ48_17625 | Not Available | Negative | 3748109 - 3748579 | 17177.5 |
| redox-regulated atpase ychf | EXZ48_17630 | Not Available | Negative | 3748735 - 3749838 | 39654.5 |
| atp-dependent clp protease adapter clps | EXZ48_17635 | Not Available | Positive | 3749997 - 3750308 | 11568.1 |
| gnat family n-acetyltransferase | EXZ48_17640 | Not Available | Negative | 3750309 - 3750767 | 16258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
