Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EXZ48_17495 | Not Available | Negative | 3721436 - 3721969 | 20175.1 |
| hypothetical protein | EXZ48_17500 | Not Available | Negative | 3722155 - 3724227 | 74848.3 |
| duf4159 domain-containing protein | EXZ48_17505 | Not Available | Negative | 3724229 - 3727039 | 99003.3 |
| duf58 domain-containing protein | EXZ48_17510 | Not Available | Negative | 3727036 - 3727956 | 34088.7 |
| moxr family atpase | EXZ48_17515 | Not Available | Negative | 3727970 - 3728983 | 36030.7 |
| duf1285 domain-containing protein | EXZ48_17520 | Not Available | Positive | 3729177 - 3729794 | 22091.8 |
| coa pyrophosphatase | EXZ48_17525 | Not Available | Positive | 3729791 - 3730423 | 23585.1 |
| cca trna nucleotidyltransferase | EXZ48_17530 | Not Available | Positive | 3730420 - 3731691 | 45336.8 |
| duf1059 domain-containing protein | EXZ48_17535 | Not Available | Negative | 3731844 - 3732035 | 7130.45 |
| hypothetical protein | EXZ48_17540 | Not Available | Negative | 3732202 - 3732450 | 9072.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
