Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe/urej family protein | EXZ48_17445 | Not Available | Negative | 3711949 - 3712527 | 19124.0 |
| atp-dependent clp protease proteolytic subunit | EXZ48_17450 | Not Available | Positive | 3712773 - 3713351 | 21211.4 |
| 2-isopropylmalate synthase | EXZ48_17455 | Not Available | Positive | 3713815 - 3715524 | 62871.9 |
| anti-sigma factor | EXZ48_17460 | Not Available | Negative | 3715619 - 3716473 | 30670.4 |
| rna polymerase sigma factor | EXZ48_17465 | Not Available | Negative | 3716476 - 3716994 | 19469.5 |
| tetratricopeptide repeat protein | EXZ48_17470 | Not Available | Negative | 3717191 - 3717817 | 23272.3 |
| metallophosphoesterase | EXZ48_17475 | Not Available | Negative | 3717955 - 3718857 | 33118.7 |
| nudix domain-containing protein | EXZ48_17480 | Not Available | Positive | 3718968 - 3719468 | 18391.2 |
| glutathione s-transferase family protein | EXZ48_17485 | Not Available | Negative | 3719471 - 3720457 | 37322.4 |
| n-acetyltransferase | EXZ48_17490 | Not Available | Positive | 3720741 - 3721271 | 18845.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
