Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf559 domain-containing protein | EXZ48_17395 | Not Available | Positive | 3701188 - 3701592 | 15397.3 |
| hypothetical protein | EXZ48_17400 | Not Available | Positive | 3701589 - 3702890 | 49730.4 |
| duf2333 family protein | EXZ48_17405 | Not Available | Positive | 3702883 - 3704034 | 43102.4 |
| formate--tetrahydrofolate ligase | EXZ48_17410 | Not Available | Positive | 3704259 - 3705938 | 60120.9 |
| duf1993 domain-containing protein | EXZ48_17415 | Not Available | Negative | 3706086 - 3706592 | 18099.7 |
| extensin | EXZ48_17420 | Not Available | Negative | 3706695 - 3707423 | 25791.5 |
| hypothetical protein | EXZ48_17425 | Not Available | Negative | 3707518 - 3707826 | 11605.8 |
| anthranilate synthase | EXZ48_17430 | Not Available | Positive | 3708220 - 3710409 | 80633.1 |
| cation transporter | EXZ48_17435 | Not Available | Positive | 3710541 - 3711461 | 32274.4 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EXZ48_17440 | Not Available | Positive | 3711448 - 3711912 | 17107.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
