Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanine deaminase | EXZ48_17185 | Not Available | Negative | 3659262 - 3660569 | 48127.5 |
| cysteine desulfurase | EXZ48_17190 | Not Available | Negative | 3660575 - 3661807 | 45722.8 |
| lysr family transcriptional regulator | EXZ48_17195 | Not Available | Negative | 3661930 - 3662817 | 32802.4 |
| hypothetical protein | EXZ48_17200 | Not Available | Positive | 3662925 - 3663104 | 7131.73 |
| xanthine dehydrogenase accessory protein xdhc | EXZ48_17205 | Not Available | Negative | 3663101 - 3663937 | 29921.8 |
| 3-hydroxybutyrate dehydrogenase | EXZ48_17210 | Not Available | Negative | 3664071 - 3664844 | 27283.8 |
| glycerol kinase | EXZ48_17215 | Not Available | Positive | 3665041 - 3666534 | 54422.9 |
| hypothetical protein | EXZ48_17220 | Not Available | Positive | 3666612 - 3667016 | 15461.4 |
| hypothetical protein | EXZ48_17225 | Not Available | Negative | 3667058 - 3667906 | 30958.6 |
| ycii family protein | EXZ48_17230 | Not Available | Positive | 3668101 - 3668475 | 13523.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
