Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| host attachment protein | EXZ48_17135 | Not Available | Positive | 3648479 - 3648931 | 16575.6 |
| methyltransferase | EXZ48_17140 | Not Available | Negative | 3648950 - 3650545 | 58007.1 |
| response regulator | EXZ48_17145 | Not Available | Positive | 3650793 - 3654452 | 131933.0 |
| 5-methylaminomethyl-2-thiouridine methyltransferase | EXZ48_17150 | Not Available | Negative | 3654457 - 3655113 | 24378.0 |
| fad-binding oxidoreductase | EXZ48_17155 | Not Available | Positive | 3655178 - 3656356 | 40568.1 |
| prc-barrel domain containing protein | EXZ48_17160 | Not Available | Negative | 3656364 - 3656738 | 14040.3 |
| allantoinase puue | EXZ48_17165 | Not Available | Positive | 3656873 - 3657805 | 35136.5 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | EXZ48_17170 | Not Available | Positive | 3657802 - 3658299 | 17659.2 |
| ureidoglycolate lyase | EXZ48_17175 | Not Available | Positive | 3658351 - 3658845 | 18445.9 |
| hydroxyisourate hydrolase | EXZ48_17180 | Not Available | Positive | 3658853 - 3659215 | 12942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
