Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | EXZ48_17085 | Not Available | Positive | 3635152 - 3636360 | 42982.1 |
| gguc protein | EXZ48_17090 | Not Available | Positive | 3636488 - 3637483 | 35534.1 |
| aldehyde dehydrogenase family protein | EXZ48_17095 | Not Available | Positive | 3637532 - 3638965 | 50849.8 |
| dihydroxy-acid dehydratase | EXZ48_17100 | Not Available | Positive | 3639020 - 3640759 | 62740.7 |
| transglutaminase family protein | EXZ48_17105 | Not Available | Negative | 3640929 - 3641750 | 29948.4 |
| hypothetical protein | EXZ48_17110 | Not Available | Negative | 3641763 - 3642704 | 35684.3 |
| circularly permuted type 2 atp-grasp protein | EXZ48_17115 | Not Available | Negative | 3642709 - 3644118 | 52475.1 |
| dmt family transporter | EXZ48_17120 | Not Available | Positive | 3644450 - 3645334 | 31242.1 |
| dead/deah box helicase | EXZ48_17125 | Not Available | Negative | 3645390 - 3646811 | 51121.7 |
| dna alkylation repair protein | EXZ48_17130 | Not Available | Negative | 3647166 - 3648266 | 40324.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
