Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | EXZ48_16880 | Not Available | Positive | 3593203 - 3593691 | 17697.0 |
| tripartite tricarboxylate transporter permease | EXZ48_16885 | Not Available | Positive | 3593702 - 3595219 | 52515.4 |
| duf475 domain-containing protein | EXZ48_16890 | Not Available | Negative | 3595680 - 3596798 | 40392.9 |
| peptidase m3 | EXZ48_16895 | Not Available | Positive | 3597181 - 3599241 | 75974.0 |
| dsbe family thiol:disulfide interchange protein | EXZ48_16900 | Not Available | Negative | 3599287 - 3599901 | 21691.1 |
| heme exporter protein ccmd | EXZ48_16905 | Not Available | Negative | 3599898 - 3600065 | 6184.38 |
| heme abc transporter permease | EXZ48_16910 | Not Available | Negative | 3600062 - 3600832 | 28401.3 |
| heme exporter protein ccmb | EXZ48_16915 | Not Available | Negative | 3600906 - 3601565 | 22587.7 |
| heme abc exporter atp-binding protein ccma | EXZ48_16920 | Not Available | Negative | 3601562 - 3602206 | 22539.4 |
| is110 family transposase | EXZ48_16925 | Not Available | Positive | 3602362 - 3602463 | 3819.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
