Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1287 domain-containing protein | EXZ48_16830 | Not Available | Positive | 3583082 - 3583693 | 22164.8 |
| lyse family translocator | EXZ48_16835 | Not Available | Negative | 3583700 - 3584341 | 22527.2 |
| sdr family nad(p)-dependent oxidoreductase | EXZ48_16840 | Not Available | Negative | 3584509 - 3585360 | 30540.5 |
| argininosuccinate synthase | EXZ48_16845 | Not Available | Positive | 3585547 - 3586770 | 45279.3 |
| bcr/cfla family efflux mfs transporter | EXZ48_16850 | Not Available | Negative | 3586843 - 3588060 | 42027.1 |
| marr family transcriptional regulator | EXZ48_16855 | Not Available | Negative | 3588057 - 3588542 | 17736.6 |
| sensor histidine kinase | EXZ48_16860 | Not Available | Negative | 3588837 - 3590228 | 49516.9 |
| response regulator transcription factor | EXZ48_16865 | Not Available | Negative | 3590225 - 3590899 | 24176.4 |
| abc transporter substrate-binding protein | EXZ48_16870 | Not Available | Positive | 3590977 - 3592044 | 39395.4 |
| tripartite tricarboxylate transporter substrate binding protein | EXZ48_16875 | Not Available | Positive | 3592262 - 3593206 | 32059.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
