Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate synthesis repressor phar | EXZ48_16780 | Not Available | Negative | 3574046 - 3574624 | 21995.3 |
| acetyl-coa c-acetyltransferase | EXZ48_16785 | Not Available | Positive | 3574916 - 3576097 | 40660.0 |
| beta-ketoacyl-acp reductase | EXZ48_16790 | Not Available | Positive | 3576184 - 3576909 | 25185.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | EXZ48_16795 | Not Available | Positive | 3576987 - 3577295 | 11408.4 |
| duf1232 domain-containing protein | EXZ48_16800 | Not Available | Positive | 3577367 - 3577756 | 14275.1 |
| hypothetical protein | EXZ48_16805 | Not Available | Positive | 3578176 - 3578679 | 17934.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EXZ48_16810 | Not Available | Positive | 3578907 - 3580148 | 46211.1 |
| abc transporter permease | EXZ48_16815 | Not Available | Positive | 3580267 - 3581220 | 32427.0 |
| abc transporter permease | EXZ48_16820 | Not Available | Positive | 3581350 - 3582228 | 30454.4 |
| abc transporter atp-binding protein | EXZ48_16825 | Not Available | Positive | 3582228 - 3583022 | 28338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
