Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | EXZ48_16730 | Not Available | Positive | 3565343 - 3566116 | 26516.0 |
| mfs transporter | EXZ48_16735 | Not Available | Positive | 3566150 - 3567343 | 41745.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EXZ48_16740 | Not Available | Positive | 3567481 - 3568734 | 44814.1 |
| lyse family translocator | EXZ48_16745 | Not Available | Negative | 3568754 - 3569398 | 23031.9 |
| histidinol-phosphate transaminase | EXZ48_16750 | Not Available | Negative | 3569510 - 3570565 | 38670.3 |
| polyprenyl synthetase family protein | EXZ48_16755 | Not Available | Negative | 3570570 - 3571487 | 32285.8 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EXZ48_16760 | Not Available | Positive | 3571695 - 3572378 | 25856.8 |
| glutathione s-transferase family protein | EXZ48_16765 | Not Available | Positive | 3572453 - 3573100 | 23863.9 |
| 50s ribosomal protein l32 | EXZ48_16770 | Not Available | Positive | 3573248 - 3573433 | 6882.33 |
| hypothetical protein | EXZ48_16775 | Not Available | Positive | 3573605 - 3574012 | 14549.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
