Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_16680 | Not Available | Negative | 3553693 - 3556245 | 89817.2 |
| abc transporter atp-binding protein | EXZ48_16685 | Not Available | Negative | 3556242 - 3556958 | 24893.2 |
| arylesterase | EXZ48_16690 | Not Available | Positive | 3557018 - 3557662 | 22710.4 |
| rna 2',3'-cyclic phosphodiesterase | EXZ48_16695 | Not Available | Positive | 3557745 - 3558326 | 21419.7 |
| phosphotyrosine protein phosphatase | EXZ48_16700 | Not Available | Negative | 3558423 - 3558743 | 11901.3 |
| helicase | EXZ48_16705 | Not Available | Positive | 3559105 - 3562170 | 112517.0 |
| rna-binding s4 domain-containing protein | EXZ48_16710 | Not Available | Positive | 3562175 - 3562594 | 15946.8 |
| ferredoxin family protein | EXZ48_16715 | Not Available | Positive | 3562787 - 3563125 | 12650.8 |
| card family transcriptional regulator | EXZ48_16720 | Not Available | Positive | 3563495 - 3564064 | 21298.5 |
| rna polymerase factor sigma-32 | EXZ48_16725 | Not Available | Positive | 3564327 - 3565187 | 31979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
