Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | EXZ48_16580 | Not Available | Negative | 3528596 - 3529756 | 40997.1 |
| d-alanyl-d-alanine carboxypeptidase | EXZ48_16585 | Not Available | Positive | 3529888 - 3531003 | 39673.9 |
| gtp-binding protein | EXZ48_16590 | Not Available | Positive | 3531070 - 3532233 | 42494.0 |
| fad-binding oxidoreductase | EXZ48_16595 | Not Available | Negative | 3532595 - 3533878 | 45617.6 |
| lysr family transcriptional regulator | EXZ48_16600 | Not Available | Negative | 3534001 - 3534897 | 33484.1 |
| voc family protein | EXZ48_16605 | Not Available | Positive | 3535066 - 3536463 | 51003.4 |
| fad-binding oxidoreductase | EXZ48_16610 | Not Available | Positive | 3536475 - 3537893 | 50467.0 |
| aldehyde dehydrogenase family protein | EXZ48_16615 | Not Available | Positive | 3537916 - 3539439 | 53626.1 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_16620 | Not Available | Positive | 3539446 - 3540678 | 44140.8 |
| saccharopine dehydrogenase family protein | EXZ48_16625 | Not Available | Negative | 3540834 - 3541934 | 39407.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
