Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor | EXZ48_16530 | Not Available | Negative | 3517379 - 3519304 | 67933.7 |
| hypothetical protein | EXZ48_16535 | Not Available | Negative | 3519571 - 3519834 | 8617.49 |
| (2fe-2s)-binding protein | EXZ48_16540 | Not Available | Positive | 3520299 - 3520790 | 17177.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EXZ48_16545 | Not Available | Positive | 3520899 - 3523250 | 83150.9 |
| xanthine dehydrogenase family protein subunit m | EXZ48_16550 | Not Available | Positive | 3523262 - 3524059 | 27362.4 |
| 5-aminolevulinate synthase | EXZ48_16555 | Not Available | Positive | 3524302 - 3525516 | 44260.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EXZ48_16560 | Not Available | Negative | 3525537 - 3526712 | 41243.4 |
| meta domain-containing protein | EXZ48_16565 | Not Available | Positive | 3526903 - 3527619 | 25360.1 |
| cap-gly domain protein | EXZ48_16570 | Not Available | Positive | 3527649 - 3528029 | 14464.5 |
| Trna-arg | Not Available | Not Available | Positive | 3528473 - 3528549 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
