Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | EXZ48_16430 | Not Available | Negative | 3492197 - 3493918 | 63728.9 |
| glycerol-3-phosphate abc transporter | EXZ48_16435 | Not Available | Negative | 3493993 - 3494412 | 15262.1 |
| carbohydrate abc transporter permease | EXZ48_16440 | Not Available | Negative | 3494412 - 3495263 | 31104.3 |
| sugar abc transporter permease | EXZ48_16445 | Not Available | Negative | 3495305 - 3496171 | 32334.3 |
| abc transporter atp-binding protein | EXZ48_16450 | Not Available | Negative | 3496174 - 3497244 | 39550.6 |
| abc transporter atp-binding protein | EXZ48_16455 | Not Available | Negative | 3497255 - 3498337 | 38833.9 |
| glycerol-3-phosphate dehydrogenase | EXZ48_16460 | Not Available | Negative | 3498378 - 3499895 | 56281.0 |
| deor/glpr transcriptional regulator | EXZ48_16465 | Not Available | Negative | 3500009 - 3500779 | 27802.3 |
| sdr family oxidoreductase | EXZ48_16470 | Not Available | Positive | 3500926 - 3501696 | 26922.4 |
| oxidoreductase | EXZ48_16475 | Not Available | Negative | 3501720 - 3502715 | 34635.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
