Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_16370 | Not Available | Negative | 3477527 - 3479356 | 67486.2 |
| thiamine diphosphokinase | EXZ48_16375 | Not Available | Negative | 3479360 - 3480019 | 22987.7 |
| atp-dependent chaperone clpb | EXZ48_16380 | Not Available | Negative | 3480165 - 3482771 | 95849.8 |
| duf4167 domain-containing protein | EXZ48_16385 | Not Available | Negative | 3483024 - 3483749 | 25807.3 |
| peptide chain release factor n(5)-glutamine methyltransferase | EXZ48_16395 | Not Available | Negative | 3484080 - 3484952 | 30804.9 |
| peptide chain release factor 1 | EXZ48_16400 | Not Available | Negative | 3484949 - 3486031 | 40117.7 |
| phosphoenolpyruvate--protein phosphotransferase | EXZ48_16405 | Not Available | Negative | 3486055 - 3488322 | 83207.0 |
| aspartate kinase | EXZ48_16410 | Not Available | Negative | 3488409 - 3489683 | 45341.7 |
| sam-dependent methyltransferase | EXZ48_16415 | Not Available | Negative | 3489802 - 3490368 | 20312.2 |
| tetr/acrr family transcriptional regulator | EXZ48_16425 | Not Available | Positive | 3491424 - 3492053 | 22786.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
