Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EXZ48_16270 | Not Available | Positive | 3457935 - 3458618 | 25570.6 |
| cyclic nucleotide-binding domain-containing protein | EXZ48_16275 | Not Available | Positive | 3458689 - 3459144 | 16463.9 |
| exodeoxyribonuclease iii | EXZ48_16280 | Not Available | Negative | 3459283 - 3460089 | 30443.6 |
| outer membrane lipoprotein carrier protein lola | EXZ48_16285 | Not Available | Negative | 3460183 - 3460839 | 24164.2 |
| dna translocase ftsk | EXZ48_16290 | Not Available | Negative | 3460953 - 3463619 | 95714.1 |
| ammonium transporter | EXZ48_16295 | Not Available | Negative | 3463863 - 3465224 | 46974.8 |
| p-ii family nitrogen regulator | EXZ48_16300 | Not Available | Negative | 3465255 - 3465593 | 12088.8 |
| acyl-coa thioesterase ii | EXZ48_16305 | Not Available | Negative | 3465824 - 3466708 | 33005.3 |
| ubiquinone biosynthesis hydroxylase | EXZ48_16310 | Not Available | Positive | 3466808 - 3468028 | 43976.9 |
| trm112 family protein | EXZ48_16315 | Not Available | Negative | 3468115 - 3468303 | 6814.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
