Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | EXZ48_16220 | Not Available | Negative | 3448432 - 3449178 | 25371.6 |
| 50s ribosomal protein l19 | EXZ48_16225 | Not Available | Positive | 3449483 - 3450001 | 18774.3 |
| transporter substrate-binding domain-containing protein | EXZ48_16230 | Not Available | Positive | 3450151 - 3450948 | 28833.3 |
| amino acid abc transporter permease | EXZ48_16235 | Not Available | Positive | 3450958 - 3451764 | 29096.7 |
| hypothetical protein | EXZ48_16240 | Not Available | Negative | 3451771 - 3453666 | 68628.4 |
| hypothetical protein | EXZ48_16245 | Not Available | Positive | 3453829 - 3453945 | 4375.43 |
| 3-isopropylmalate dehydratase large subunit | EXZ48_16250 | Not Available | Positive | 3454031 - 3455440 | 50751.6 |
| histidine phosphatase family protein | EXZ48_16255 | Not Available | Positive | 3455514 - 3456026 | 18032.6 |
| aldo/keto reductase | EXZ48_16260 | Not Available | Negative | 3456317 - 3457147 | 30886.6 |
| l,d-transpeptidase | EXZ48_16265 | Not Available | Negative | 3457279 - 3457824 | 20475.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
