Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_16070 | Not Available | Positive | 3422376 - 3422840 | 17605.6 |
| methyltransferase | EXZ48_16075 | Not Available | Negative | 3422856 - 3423518 | 23912.6 |
| eve domain-containing protein | EXZ48_16080 | Not Available | Negative | 3423583 - 3424014 | 16292.5 |
| hypothetical protein | EXZ48_16085 | Not Available | Negative | 3424021 - 3424314 | 10548.4 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | EXZ48_16090 | Not Available | Negative | 3424358 - 3425344 | 32841.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EXZ48_16095 | Not Available | Negative | 3425341 - 3426435 | 38419.3 |
| hydroxymethylbilane synthase | EXZ48_16100 | Not Available | Positive | 3426511 - 3427440 | 33056.5 |
| uroporphyrinogen-iii synthase | EXZ48_16105 | Not Available | Positive | 3427444 - 3428169 | 25842.5 |
| hypothetical protein | EXZ48_16110 | Not Available | Positive | 3428281 - 3429531 | 43172.9 |
| heme biosynthesis protein hemy | EXZ48_16115 | Not Available | Positive | 3429545 - 3431152 | 58555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
