Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | EXZ48_15970 | Not Available | Positive | 3401398 - 3402333 | 33418.5 |
| polysaccharide biosynthesis protein gumn | EXZ48_15975 | Not Available | Positive | 3402475 - 3403557 | 38375.5 |
| duf2867 domain-containing protein | EXZ48_15980 | Not Available | Negative | 3403561 - 3404058 | 18335.6 |
| dihydrolipoyl dehydrogenase | EXZ48_15985 | Not Available | Negative | 3404142 - 3405548 | 48532.9 |
| sdr family oxidoreductase | EXZ48_15990 | Not Available | Negative | 3405573 - 3406325 | 25525.6 |
| hypothetical protein | EXZ48_15995 | Not Available | Negative | 3406322 - 3406810 | 16736.8 |
| lyse family translocator | EXZ48_16000 | Not Available | Negative | 3406814 - 3407458 | 23108.9 |
| hypothetical protein | EXZ48_16005 | Not Available | Negative | 3407657 - 3408070 | 14757.7 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EXZ48_16010 | Not Available | Negative | 3408175 - 3409410 | 43030.0 |
| 2-oxoglutarate dehydrogenase e1 component | EXZ48_16015 | Not Available | Negative | 3409462 - 3412458 | 111836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
