Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | EXZ48_15920 | Not Available | Positive | 3389516 - 3390265 | 27304.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | EXZ48_15925 | Not Available | Negative | 3390272 - 3391699 | 51556.4 |
| f0f1 atp synthase subunit epsilon | EXZ48_15930 | Not Available | Negative | 3391922 - 3392329 | 14586.5 |
| f0f1 atp synthase subunit beta | EXZ48_15935 | Not Available | Negative | 3392452 - 3393981 | 53681.2 |
| f0f1 atp synthase subunit gamma | EXZ48_15940 | Not Available | Negative | 3394008 - 3394889 | 31702.7 |
| f0f1 atp synthase subunit alpha | EXZ48_15945 | Not Available | Negative | 3395006 - 3396535 | 54678.0 |
| f0f1 atp synthase subunit delta | EXZ48_15950 | Not Available | Negative | 3396535 - 3397101 | 19467.6 |
| duf4345 domain-containing protein | EXZ48_15955 | Not Available | Negative | 3397364 - 3397747 | 13306.4 |
| primosomal protein n' | EXZ48_15960 | Not Available | Negative | 3397852 - 3400056 | 80832.3 |
| atpase | EXZ48_15965 | Not Available | Negative | 3400115 - 3401251 | 42002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
