Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | EXZ48_15870 | Not Available | Positive | 3380334 - 3381191 | 30198.2 |
| duf1178 family protein | EXZ48_15875 | Not Available | Positive | 3381188 - 3381616 | 15960.9 |
| duf3291 domain-containing protein | EXZ48_15880 | Not Available | Positive | 3381616 - 3382194 | 21184.8 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EXZ48_15885 | Not Available | Negative | 3382221 - 3382970 | 27154.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | EXZ48_15890 | Not Available | Negative | 3383065 - 3384189 | 42077.2 |
| aldehyde dehydrogenase family protein | EXZ48_15895 | Not Available | Negative | 3384262 - 3385761 | 53817.6 |
| iron-containing alcohol dehydrogenase | EXZ48_15900 | Not Available | Negative | 3385770 - 3386912 | 39142.3 |
| lysr family transcriptional regulator | EXZ48_15905 | Not Available | Positive | 3387016 - 3387927 | 33045.6 |
| hypothetical protein | EXZ48_15910 | Not Available | Positive | 3388077 - 3388838 | 28805.6 |
| hypothetical protein | EXZ48_15915 | Not Available | Positive | 3388835 - 3389458 | 22417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
