Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | EXZ48_15820 | Not Available | Negative | 3371291 - 3374017 | 101889.0 |
| peptidylprolyl isomerase | EXZ48_15825 | Not Available | Positive | 3374256 - 3375155 | 32563.7 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | EXZ48_15830 | Not Available | Positive | 3375206 - 3376438 | 42891.1 |
| gnat family n-acetyltransferase | EXZ48_15835 | Not Available | Positive | 3376451 - 3377230 | 28341.9 |
| 8-oxo-dgtp diphosphatase mutt | EXZ48_15840 | Not Available | Positive | 3377227 - 3377649 | 15696.2 |
| hypothetical protein | EXZ48_15845 | Not Available | Positive | 3377762 - 3378079 | 11251.6 |
| flp family type ivb pilin | EXZ48_15850 | Not Available | Positive | 3378119 - 3378301 | 6107.5 |
| methyltransferase domain-containing protein | EXZ48_15855 | Not Available | Negative | 3378307 - 3379176 | 31453.9 |
| comf family protein | EXZ48_15860 | Not Available | Positive | 3379239 - 3380030 | 28572.9 |
| glutaredoxin 3 | EXZ48_15865 | Not Available | Positive | 3380066 - 3380323 | 9526.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
