Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_15770 | Not Available | Positive | 3361048 - 3362169 | 40291.6 |
| abc transporter substrate-binding protein | EXZ48_15775 | Not Available | Positive | 3362242 - 3363327 | 38440.4 |
| inositol monophosphatase | EXZ48_15780 | Not Available | Positive | 3363445 - 3364290 | 29356.6 |
| hypothetical protein | EXZ48_15785 | Not Available | Negative | 3364586 - 3364768 | 6347.45 |
| hypothetical protein | EXZ48_15790 | Not Available | Negative | 3364821 - 3365294 | 18373.2 |
| hypothetical protein | EXZ48_15795 | Not Available | Positive | 3365561 - 3365893 | 12435.4 |
| bon domain-containing protein | EXZ48_15800 | Not Available | Positive | 3366319 - 3366582 | 9125.65 |
| amp-dependent synthetase | EXZ48_15805 | Not Available | Positive | 3366659 - 3368302 | 59658.8 |
| gnat family n-acetyltransferase | EXZ48_15810 | Not Available | Negative | 3368351 - 3369619 | 47277.9 |
| lipopolysaccharide biosynthesis protein | EXZ48_15815 | Not Available | Negative | 3369609 - 3371036 | 51358.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
