Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | EXZ48_15720 | Not Available | Positive | 3347174 - 3348451 | 45855.6 |
| acyltransferase | EXZ48_15725 | Not Available | Positive | 3348469 - 3349482 | 35953.9 |
| two-component sensor histidine kinase | EXZ48_15730 | Not Available | Negative | 3349497 - 3351599 | 75080.7 |
| response regulator transcription factor | EXZ48_15735 | Not Available | Negative | 3351596 - 3352336 | 27150.7 |
| abc transporter substrate-binding protein | EXZ48_15740 | Not Available | Positive | 3352600 - 3353592 | 35091.7 |
| abc transporter substrate-binding protein | EXZ48_15745 | Not Available | Positive | 3353715 - 3354743 | 37215.1 |
| iron abc transporter permease | EXZ48_15750 | Not Available | Positive | 3354816 - 3357029 | 78864.0 |
| abc transporter atp-binding protein | EXZ48_15755 | Not Available | Positive | 3357026 - 3358087 | 37536.3 |
| inositol monophosphatase | EXZ48_15760 | Not Available | Positive | 3358199 - 3358999 | 28424.9 |
| iron abc transporter permease | EXZ48_15765 | Not Available | Positive | 3359222 - 3361048 | 65416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
