Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | EXZ48_15615 | Not Available | Positive | 3319538 - 3320530 | 34614.5 |
| enoyl-coa hydratase/isomerase family protein | EXZ48_15625 | Not Available | Positive | 3322236 - 3322985 | 26832.2 |
| atp-dependent acyl-coa ligase | EXZ48_15630 | Not Available | Positive | 3322994 - 3324619 | 58915.4 |
| prka family serine protein kinase | EXZ48_15635 | Not Available | Positive | 3324768 - 3326717 | 73878.6 |
| yeah/yhbh family protein | EXZ48_15640 | Not Available | Positive | 3326743 - 3328065 | 50735.3 |
| spovr family protein | EXZ48_15645 | Not Available | Positive | 3328079 - 3329620 | 59110.9 |
| polysaccharide biosynthesis tyrosine autokinase | EXZ48_15650 | Not Available | Negative | 3329658 - 3332042 | 86348.1 |
| utp--glucose-1-phosphate uridylyltransferase | EXZ48_15655 | Not Available | Negative | 3332102 - 3333007 | 32180.8 |
| glycosyltransferase family 2 protein | EXZ48_15660 | Not Available | Negative | 3333012 - 3334043 | 36874.4 |
| glycosyltransferase family 2 protein | EXZ48_15665 | Not Available | Negative | 3334040 - 3334969 | 32586.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
