Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EXZ48_15515 | Not Available | Negative | 3296374 - 3296922 | 19973.5 |
| hamp domain-containing protein | EXZ48_15520 | Not Available | Negative | 3296927 - 3299284 | 86406.8 |
| methyltransferase domain-containing protein | EXZ48_15525 | Not Available | Negative | 3299281 - 3300459 | 43717.4 |
| ubiquinone biosynthesis methyltransferase ubie | EXZ48_15530 | Not Available | Negative | 3300456 - 3300974 | 18811.2 |
| hypothetical protein | EXZ48_15535 | Not Available | Positive | 3301168 - 3302109 | 34080.0 |
| hypothetical protein | EXZ48_15540 | Not Available | Negative | 3302054 - 3302233 | 6246.39 |
| duf3365 domain-containing protein | EXZ48_15545 | Not Available | Positive | 3302411 - 3303163 | 26544.7 |
| response regulator | EXZ48_15550 | Not Available | Positive | 3303160 - 3305907 | 99676.2 |
| response regulator | EXZ48_15555 | Not Available | Positive | 3305904 - 3306275 | 13328.1 |
| imma/irre family metallo-endopeptidase | EXZ48_15560 | Not Available | Negative | 3306285 - 3307694 | 52416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
