Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | EXZ48_15465 | Not Available | Positive | 3281830 - 3282390 | 20084.6 |
| type vi secretion system baseplate subunit tssk | EXZ48_15470 | Not Available | Positive | 3282465 - 3283796 | 48141.1 |
| hypothetical protein | EXZ48_15475 | Not Available | Positive | 3283807 - 3285249 | 51982.1 |
| hypothetical protein | EXZ48_15480 | Not Available | Positive | 3285246 - 3287033 | 65097.4 |
| type vi secretion system membrane subunit tssm | EXZ48_15485 | Not Available | Positive | 3286874 - 3290545 | 133462.0 |
| type vi secretion system baseplate subunit tssf | EXZ48_15490 | Not Available | Positive | 3290642 - 3292477 | 67346.6 |
| type vi secretion system baseplate subunit tssg | EXZ48_15495 | Not Available | Positive | 3292441 - 3293532 | 39631.6 |
| methyltransferase domain-containing protein | EXZ48_15500 | Not Available | Positive | 3293651 - 3295189 | 55777.8 |
| hypothetical protein | EXZ48_15505 | Not Available | Positive | 3295194 - 3295961 | 27001.8 |
| hypothetical protein | EXZ48_15510 | Not Available | Negative | 3296006 - 3296344 | 12440.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
