Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EXZ48_15315 | Not Available | Negative | 3250767 - 3251639 | 32763.3 |
| gntr family transcriptional regulator | EXZ48_15320 | Not Available | Positive | 3251854 - 3252774 | 34451.9 |
| acyclic terpene utilization atua family protein | EXZ48_15325 | Not Available | Positive | 3252771 - 3254129 | 48121.5 |
| duf4387 family protein | EXZ48_15330 | Not Available | Positive | 3254122 - 3254424 | 11128.5 |
| tripartite tricarboxylate transporter substrate binding protein | EXZ48_15335 | Not Available | Positive | 3254641 - 3255594 | 32259.8 |
| tripartite tricarboxylate transporter tctb family protein | EXZ48_15340 | Not Available | Positive | 3255616 - 3256098 | 17456.7 |
| tripartite tricarboxylate transporter permease | EXZ48_15345 | Not Available | Positive | 3256100 - 3257617 | 53435.9 |
| ldh family oxidoreductase | EXZ48_15350 | Not Available | Positive | 3257700 - 3258779 | 37868.9 |
| hydroxypyruvate isomerase | EXZ48_15355 | Not Available | Positive | 3258779 - 3259564 | 27744.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_15360 | Not Available | Positive | 3259561 - 3260937 | 48613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
