Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wgr domain-containing protein | EXZ48_15215 | Not Available | Positive | 3228769 - 3229026 | 10134.1 |
| transcriptional regulator | EXZ48_15220 | Not Available | Positive | 3229727 - 3230068 | 12229.7 |
| type ii toxin-antitoxin system hipa family toxin | EXZ48_15225 | Not Available | Positive | 3230068 - 3231348 | 45619.3 |
| hydroxyacylglutathione hydrolase | EXZ48_15230 | Not Available | Negative | 3231425 - 3232852 | 49757.7 |
| serine hydrolase family protein | EXZ48_15235 | Not Available | Negative | 3232862 - 3233494 | 22871.5 |
| eal domain-containing protein | EXZ48_15240 | Not Available | Negative | 3233719 - 3236418 | 96349.8 |
| abc transporter substrate-binding protein | EXZ48_15245 | Not Available | Negative | 3236447 - 3237547 | 39278.2 |
| hypothetical protein | EXZ48_15250 | Not Available | Positive | 3237795 - 3238142 | 12656.8 |
| gnat family n-acetyltransferase | EXZ48_15255 | Not Available | Negative | 3238161 - 3238595 | 15949.8 |
| hypothetical protein | EXZ48_15260 | Not Available | Negative | 3238796 - 3239080 | 10043.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
