Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | EXZ48_15115 | Not Available | Negative | 3205058 - 3206491 | 51392.5 |
| n-acetylglucosaminyltransferase | EXZ48_15120 | Not Available | Negative | 3206495 - 3208351 | 69625.8 |
| udp-glucose 4-epimerase gale | EXZ48_15125 | Not Available | Negative | 3208348 - 3209334 | 35158.9 |
| sdr family oxidoreductase | EXZ48_15130 | Not Available | Negative | 3209437 - 3210450 | 37552.8 |
| helix-turn-helix domain-containing protein | EXZ48_15135 | Not Available | Positive | 3211055 - 3212188 | 41509.5 |
| rna polymerase subunit sigma-24 | EXZ48_15140 | Not Available | Negative | 3212317 - 3213309 | 36841.2 |
| hypothetical protein | EXZ48_15145 | Not Available | Positive | 3213471 - 3214817 | 49811.2 |
| hypothetical protein | EXZ48_15150 | Not Available | Positive | 3214947 - 3215195 | 8571.9 |
| amidohydrolase | EXZ48_15155 | Not Available | Positive | 3215646 - 3217070 | 49357.8 |
| m28 family peptidase | EXZ48_15160 | Not Available | Positive | 3217063 - 3218757 | 61614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
