Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_15065 | Not Available | Negative | 3196290 - 3197237 | 33773.6 |
| abc transporter permease | EXZ48_15070 | Not Available | Negative | 3197242 - 3198126 | 31247.0 |
| decarboxylase | EXZ48_15075 | Not Available | Negative | 3198153 - 3198875 | 25675.2 |
| abc transporter substrate-binding protein | EXZ48_15080 | Not Available | Negative | 3198917 - 3200506 | 57181.8 |
| lysr family transcriptional regulator | EXZ48_15085 | Not Available | Positive | 3200660 - 3201631 | 35645.3 |
| hypothetical protein | EXZ48_15090 | Not Available | Negative | 3202145 - 3202363 | 8557.58 |
| hypothetical protein | EXZ48_15095 | Not Available | Positive | 3202542 - 3202847 | 11131.6 |
| duf995 domain-containing protein | EXZ48_15100 | Not Available | Negative | 3202975 - 3203520 | 20338.4 |
| beta-mannosidase | EXZ48_15105 | Not Available | Negative | 3203574 - 3204512 | 34796.9 |
| duf995 domain-containing protein | EXZ48_15110 | Not Available | Negative | 3204526 - 3205050 | 19487.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
