Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | EXZ48_14965 | Not Available | Negative | 3175170 - 3177044 | 65999.9 |
| hypothetical protein | EXZ48_14970 | Not Available | Negative | 3177378 - 3177647 | 9853.25 |
| lysr family transcriptional regulator | EXZ48_14975 | Not Available | Negative | 3177867 - 3178781 | 33440.5 |
| sdr family oxidoreductase | EXZ48_14980 | Not Available | Positive | 3178854 - 3179681 | 28868.5 |
| calcium-binding protein | EXZ48_14985 | Not Available | Negative | 3179980 - 3180978 | 34857.0 |
| marr family transcriptional regulator | EXZ48_14990 | Not Available | Negative | 3181140 - 3181700 | 20823.9 |
| cupin domain-containing protein | EXZ48_14995 | Not Available | Positive | 3181874 - 3182233 | 13002.4 |
| doxx family protein | EXZ48_15000 | Not Available | Positive | 3182289 - 3182732 | 15750.8 |
| crp/fnr family transcriptional regulator | EXZ48_15005 | Not Available | Positive | 3182729 - 3183607 | 33016.2 |
| methyltransferase domain-containing protein | EXZ48_15010 | Not Available | Positive | 3183674 - 3184252 | 20929.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
