Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EXZ48_14915 | Not Available | Positive | 3163424 - 3164101 | 25054.2 |
| sdr family oxidoreductase | EXZ48_14920 | Not Available | Negative | 3164121 - 3164864 | 26070.3 |
| abc transporter permease | EXZ48_14925 | Not Available | Negative | 3164947 - 3165750 | 28199.7 |
| abc transporter permease | EXZ48_14930 | Not Available | Negative | 3165754 - 3167040 | 46018.2 |
| abc transporter substrate-binding protein | EXZ48_14935 | Not Available | Negative | 3167025 - 3168071 | 37451.0 |
| extracellular solute-binding protein | EXZ48_14940 | Not Available | Negative | 3168083 - 3169111 | 37774.9 |
| aspartate aminotransferase family protein | EXZ48_14945 | Not Available | Negative | 3169150 - 3170451 | 46779.0 |
| transketolase | EXZ48_14950 | Not Available | Negative | 3170463 - 3171440 | 35045.2 |
| transketolase | EXZ48_14955 | Not Available | Negative | 3171437 - 3172300 | 31731.9 |
| penicillin amidase | EXZ48_14960 | Not Available | Positive | 3172556 - 3174931 | 87088.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
