Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | EXZ48_14815 | Not Available | Negative | 3137849 - 3139354 | 55274.8 |
| duf1127 domain-containing protein | EXZ48_14820 | Not Available | Positive | 3139489 - 3139692 | 7622.19 |
| mfs transporter | EXZ48_14825 | Not Available | Positive | 3139717 - 3140883 | 40284.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EXZ48_14830 | Not Available | Positive | 3140968 - 3142080 | 40772.0 |
| helix-turn-helix transcriptional regulator | EXZ48_14835 | Not Available | Negative | 3142087 - 3142908 | 30308.4 |
| cysteine desulfurase-like protein | EXZ48_14840 | Not Available | Negative | 3143053 - 3144303 | 45136.9 |
| glutathione-dependent disulfide-bond oxidoreductase | EXZ48_14845 | Not Available | Negative | 3144464 - 3145378 | 33474.4 |
| diguanylate cyclase | EXZ48_14850 | Not Available | Positive | 3145560 - 3147362 | 65558.6 |
| sdr family nad(p)-dependent oxidoreductase | EXZ48_14855 | Not Available | Negative | 3147416 - 3148246 | 29260.8 |
| lysr family transcriptional regulator | EXZ48_14860 | Not Available | Positive | 3148366 - 3149262 | 33024.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
